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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923480.1_cds_XP_016472084.1_64355
CDS Infomation

[gene=LOC107794134] [db_xref=GeneID:107794134] [protein=RHOMBOID-like protein 1] [protein_id=XP_016472084.1] [location=join(32932..33245,35458..35621,38021..38184,38309..38568,39536..39662,39812..39934)] [gbkey=CDS]
Sequence

ATGGCCGGAAGTGTACCGGAGATCCAAATCCAGGTCAATTCAAAGAAAGGGGGTAACTCA
ATACACCCAGTAGAGCCAGCAAGAACATCAGCAGGAGGAGGACCACCTGTTGTCTATAGA
GAAATTAAGCATTTCAAGAAATGGTTTCCATGGTTGATACCATCTTTCGTTATAGCCAAT
GTGGTGACTTTTTTTGTGACCATGTATGTTAATAACTGCCCCCACAACTCTGTTTCTTGT
GTTGCTGGATTCTTGGGTAGATTTTCCTTTCAGCCTTTCAGTGAAAATCCTCTTCTTGGG
CCTTCTTCTAACACACTAGAGAAGATGGGTGCTTTAGACGTGAATAAGGTGGTCCACGGA
CATGAAGGGTGGCGCCTTATTACTTGCATGTGGTTGCATGGTGGAGTTTTTCATTTACTG
GCCAACATGCTGAGTCTGATAGTCATTGGCATTCGGCTGGAGCGAGAGTTTGGATTTGTA
CGCATTGGCCTGCTCTATATCATTGCGGGACTTGGTGGCAGCTTGTTCTCAGCTCTATTT
ATTAAGTCAAATATATCTGTTGGTGCTTCTGGTGCACTTTTTGGGTTGCTGGGAAGCATG
CTTTCTGAGCTGATAATCAATTGGACTATATACGCCAATAAGCTCGCAGTTTTAGTGACT
CTTGTGGTCATCATTGTTATAAATCTGGCAGTCGGAATTCTCCCGCATGTTGACAACTTC
GCTCATATTGGAGGATTTATGTCTGGTTTTCTTCTCGGTTTCGTGTTTCTGATTCGGCCC
CAATTTGGTTGGGTGAGTCAGAGATATGCATCCAGTGGATATTCTTCAACATCAGCTAAA
CCTAAATTCAAGGTGTATCAGATGGTCCTATGGGTTATTTCTCTTGTTCTTCTGATAATC
GGGTTCACTAGTGGCTTGGTCATGCTTCTCCGCGGAGTAGATTTGAACGATCATTGTTCT
TGGTGCCATTATATGAGCTGTGTACCCACTTCAAGGTGGAGTTGTAACTCAGAGCCTGTT
TCCTGTATGTCTGAGCAAACAGATAACCAGCTTACATTGACATGCTCCAATAGCAACAAA
ACAAGATCATATTCTTTGTCGAATCCAAGTACGTCTAAGATCCAGGGGCTGTGCAGTCAG
CTCTGTCGTTGA

Peptide Sequence

PEP ID

XP_016472084.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 1 [Nicotiana tabacum]
Sequence

MAGSVPEIQIQVNSKKGGNSIHPVEPARTSAGGGPPVVYREIKHFKKWFPWLIPSFVIAN
VVTFFVTMYVNNCPHNSVSCVAGFLGRFSFQPFSENPLLGPSSNTLEKMGALDVNKVVHG
HEGWRLITCMWLHGGVFHLLANMLSLIVIGIRLEREFGFVRIGLLYIIAGLGGSLFSALF
IKSNISVGASGALFGLLGSMLSELIINWTIYANKLAVLVTLVVIIVINLAVGILPHVDNF
AHIGGFMSGFLLGFVFLIRPQFGWVSQRYASSGYSSTSAKPKFKVYQMVLWVISLVLLII
GFTSGLVMLLRGVDLNDHCSWCHYMSCVPTSRWSCNSEPVSCMSEQTDNQLTLTCSNSNK
TRSYSLSNPSTSKIQGLCSQLCR

Transcript Sequence

Gene sequence data has not been registered.